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<html> <body> <h1>Welcome</h1> <p> The files listed below are configured for visualization using <a href="http://www.bioviz.org/igb">Integrated Genome Browser</a>. For instructions on how to view them in IGB, go to the <a href="..">Parent Directory</a>. </p> </body> </html>
| Name | Last modified | Size | Description |
|---|---|---|---|---|
| Parent Directory | - | ||
| GI3MI6V02.fastq_trimmed_sorted.bam | 2017-07-25 13:59 | 146M | Binary alignments file |
| annots.xml | 2017-07-25 13:59 | 38K | Annotation and data file list |
| V_corymbosum_scaffold_May_2013.2bit | 2017-07-25 13:59 | 154M | Sequence data in blat 2bit format |
| GI3MI6V02.fastq_trimmed_sorted.bam.bai | 2017-07-25 13:59 | 1.3M | Index for binary alignments (bam) file |
| GI3MI6V01.fastq_trimmed_sorted.bam.bai | 2017-07-25 13:59 | 1.2M | Index for binary alignments (bam) file |
| Cufflinks_6K.bed.gz.tbi | 2017-07-25 13:59 | 211K | Tabix index file |
| onrip.fastq_sorted.bam.bai | 2017-07-25 13:59 | 1.2M | Index for binary alignments (bam) file |
| onrip.fastq_trimmed_sorted.bam.bai | 2017-07-25 13:59 | 1.2M | Index for binary alignments (bam) file |
| bb_se_TH2.0.6_6K_processed/ | 2017-07-25 13:59 | - | Blueberry development RNA-Seq read alignments, coverage graphcs, junctions, etc. |
| V_corymbosum_scaffold_May_2013.bed.gz.tbi | 2017-07-25 13:59 | 218K | Tabix index file |
| V_corymbosum_scaffold_May_2013.bed.gz | 2017-07-25 13:52 | 2.2M | Annotation or junction file |
| EST.bed.gz | 2017-07-25 13:52 | 497K | Annotation or junction file |
| Cufflinks_6K.bed.gz | 2017-07-25 13:52 | 2.3M | Annotation or junction file |
| 01_bams/ | 2017-07-25 13:52 | - | Alignments of 454 reads from Rowland, 2012 |
| V_corymbosum_scaffold_May_2013.fa.gz | 2017-07-25 13:52 | 97M | Sequence data in compressed fasta format |
| EST.bed.gz.tbi | 2017-07-25 13:52 | 80K | Tabix index file |
| GI3MI6V01.fastq_trimmed_sorted.bam | 2017-07-25 13:52 | 121M | Binary alignments file |
| 11_CombineGFF3/ | 2017-07-25 13:52 | - | Contains gene models, by program |
| onunr.fastq_trimmed_sorted.bam | 2017-07-25 13:52 | 136M | Binary alignments file |
| onunr.fastq_sorted.bam.bai | 2017-07-25 13:52 | 1.2M | Index for binary alignments (bam) file |
| favicon.ico | 2017-07-25 13:52 | 5.3K | Icon IGB displays for this data source in the Data Access tab |
| V_corymbosum_scaffold_May_2013_withDescr.bed.gz.tbi | 2017-07-25 13:52 | 223K | Tabix index file |
| V_corymbosum_scaffold_May_2013_wDescrPwy.bed.gz.tbi | 2017-07-25 13:52 | 221K | Tabix index file |
| onunr.fastq_trimmed_sorted.bam.bai | 2017-07-25 13:52 | 1.2M | Index for binary alignments (bam) file |
| onrip.fastq_trimmed_sorted.bam | 2017-07-25 13:52 | 132M | Binary alignments file |
| V_corymbosum_scaffold_May_2013_withDescr.bed.gz | 2017-07-25 13:52 | 3.1M | Annotation or junction file |
| V_corymbosum_scaffold_May_2013_wDescrPwy.bed.gz | 2017-07-25 13:52 | 3.1M | Annotation or junction file |
| genome.txt | 2017-07-25 13:52 | 260K | Chromosome lengths and assembly information |
| build.xml | 2017-07-25 13:52 | 534 | Build file for Lucene indexing code |