strapdown: '/quickload/styling/strapdown/v/0.2/strapdown.js'}; 
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<h1>RNA-Seq data</h1>
<p>
This directory contains processed data files from the RNA-Seq experiment described in
the article titled
<a href="http://www.ncbi.nlm.nih.gov/pubmed/24777346">Genome-Wide
Analysis of Heat-Sensitive Alternative Splicing in Physcomitrella
patens</a>. 
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[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]C-101.FJ.bed.gz2017-07-25 15:40 2.0MLoraine Lab FindJunctions file
[ ]C-101.FJ.bed.gz.tbi2017-07-25 15:41 120KTabix index file
[TXT]C-101.alignments_distribution.txt2017-07-25 15:39 390 Read alignment distribution
[ ]C-101.bam2017-07-25 15:39 835MBinary alignments file
[ ]C-101.bam.bai2017-07-25 15:38 734KIndex for binary alignments (bam) file
[ ]C-101.bed2017-07-25 15:40 9.0MAnnotation or junction file
[ ]C-101.bed.gz2017-07-25 15:39 2.3MAnnotation or junction file
[ ]C-101.bed.gz.tbi2017-07-25 15:41 125KTabix index file
[ ]C-101.bedgraph.gz2017-07-25 15:41 45MBedGraph (wiggle) format file
[ ]C-101.bedgraph.gz.tbi2017-07-25 15:40 213KBedGraph (wiggle) format file
[ ]C-101.mm.bam2017-07-25 15:41 192MBinary alignments file
[ ]C-101.mm.bam.bai2017-07-25 15:41 519KIndex for binary alignments (bam) file
[ ]C-101.mm.bedgraph.gz2017-07-25 15:40 5.0MBedGraph (wiggle) format file
[ ]C-101.mm.bedgraph.gz.tbi2017-07-25 15:38 134KBedGraph (wiggle) format file
[ ]C-101.sm.bam2017-07-25 15:40 643MBinary alignments file
[ ]C-101.sm.bam.bai2017-07-25 15:39 702KIndex for binary alignments (bam) file
[ ]C-101.sm.bedgraph.gz2017-07-25 15:40 42MBedGraph (wiggle) format file
[ ]C-101.sm.bedgraph.gz.tbi2017-07-25 15:41 201KBedGraph (wiggle) format file
[ ]C-75.FJ.bed.gz2017-07-25 15:41 3.9KLoraine Lab FindJunctions file
[ ]C-75.FJ.bed.gz.tbi2017-07-25 15:41 2.5KTabix index file
[TXT]C-75.alignments_distribution.txt2017-07-25 15:39 288 Read alignment distribution
[ ]C-75.bam2017-07-25 15:40 65KBinary alignments file
[ ]C-75.bam.bai2017-07-25 15:39 73KIndex for binary alignments (bam) file
[ ]C-75.bed2017-07-25 15:40 26KAnnotation or junction file
[ ]C-75.bed.gz2017-07-25 15:40 6.3KAnnotation or junction file
[ ]C-75.bed.gz.tbi2017-07-25 15:38 3.0KTabix index file
[ ]C-75.bedgraph.gz2017-07-25 15:40 7.7KBedGraph (wiggle) format file
[ ]C-75.bedgraph.gz.tbi2017-07-25 15:40 3.7KBedGraph (wiggle) format file
[ ]C-75.mm.bam2017-07-25 15:41 40KBinary alignments file
[ ]C-75.mm.bam.bai2017-07-25 15:38 23KIndex for binary alignments (bam) file
[ ]C-75.mm.bedgraph.gz2017-07-25 15:40 3.1KBedGraph (wiggle) format file
[ ]C-75.mm.bedgraph.gz.tbi2017-07-25 15:39 930 BedGraph (wiggle) format file
[ ]C-75.sm.bam2017-07-25 15:41 48KBinary alignments file
[ ]C-75.sm.bam.bai2017-07-25 15:39 68KIndex for binary alignments (bam) file
[ ]C-75.sm.bedgraph.gz2017-07-25 15:41 4.5KBedGraph (wiggle) format file
[ ]C-75.sm.bedgraph.gz.tbi2017-07-25 15:38 3.2KBedGraph (wiggle) format file
[ ]C-76.FJ.bed.gz2017-07-25 15:38 1.4MLoraine Lab FindJunctions file
[ ]C-76.FJ.bed.gz.tbi2017-07-25 15:38 106KTabix index file
[TXT]C-76.alignments_distribution.txt2017-07-25 15:39 367 Read alignment distribution
[ ]C-76.bam2017-07-25 15:40 359MBinary alignments file
[ ]C-76.bam.bai2017-07-25 15:40 729KIndex for binary alignments (bam) file
[ ]C-76.bed2017-07-25 15:40 6.0MAnnotation or junction file
[ ]C-76.bed.gz2017-07-25 15:39 1.5MAnnotation or junction file
[ ]C-76.bed.gz.tbi2017-07-25 15:39 111KTabix index file
[ ]C-76.bedgraph.gz2017-07-25 15:41 30MBedGraph (wiggle) format file
[ ]C-76.bedgraph.gz.tbi2017-07-25 15:39 211KBedGraph (wiggle) format file
[ ]C-76.mm.bam2017-07-25 15:40 90MBinary alignments file
[ ]C-76.mm.bam.bai2017-07-25 15:39 451KIndex for binary alignments (bam) file
[ ]C-76.mm.bedgraph.gz2017-07-25 15:41 3.4MBedGraph (wiggle) format file
[ ]C-76.mm.bedgraph.gz.tbi2017-07-25 15:39 106KBedGraph (wiggle) format file
[ ]C-76.sm.bam2017-07-25 15:41 269MBinary alignments file
[ ]C-76.sm.bam.bai2017-07-25 15:40 683KIndex for binary alignments (bam) file
[ ]C-76.sm.bedgraph.gz2017-07-25 15:41 27MBedGraph (wiggle) format file
[ ]C-76.sm.bedgraph.gz.tbi2017-07-25 15:39 195KBedGraph (wiggle) format file
[ ]C-94.FJ.bed.gz2017-07-25 15:41 5.4KLoraine Lab FindJunctions file
[ ]C-94.FJ.bed.gz.tbi2017-07-25 15:40 3.0KTabix index file
[TXT]C-94.alignments_distribution.txt2017-07-25 15:38 286 Read alignment distribution
[ ]C-94.bam2017-07-25 15:39 105KBinary alignments file
[ ]C-94.bam.bai2017-07-25 15:39 78KIndex for binary alignments (bam) file
[ ]C-94.bed2017-07-25 15:39 36KAnnotation or junction file
[ ]C-94.bed.gz2017-07-25 15:41 8.3KAnnotation or junction file
[ ]C-94.bed.gz.tbi2017-07-25 15:39 3.3KTabix index file
[ ]C-94.bedgraph.gz2017-07-25 15:41 11KBedGraph (wiggle) format file
[ ]C-94.bedgraph.gz.tbi2017-07-25 15:39 4.2KBedGraph (wiggle) format file
[ ]C-94.mm.bam2017-07-25 15:39 57KBinary alignments file
[ ]C-94.mm.bam.bai2017-07-25 15:41 26KIndex for binary alignments (bam) file
[ ]C-94.mm.bedgraph.gz2017-07-25 15:41 4.2KBedGraph (wiggle) format file
[ ]C-94.mm.bedgraph.gz.tbi2017-07-25 15:40 817 BedGraph (wiggle) format file
[ ]C-94.sm.bam2017-07-25 15:41 72KBinary alignments file
[ ]C-94.sm.bam.bai2017-07-25 15:41 74KIndex for binary alignments (bam) file
[ ]C-94.sm.bedgraph.gz2017-07-25 15:41 6.9KBedGraph (wiggle) format file
[ ]C-94.sm.bedgraph.gz.tbi2017-07-25 15:41 3.8KBedGraph (wiggle) format file
[ ]H1-101.FJ.bed.gz2017-07-25 15:39 2.3MLoraine Lab FindJunctions file
[ ]H1-101.FJ.bed.gz.tbi2017-07-25 15:41 123KTabix index file
[TXT]H1-101.alignments_distribution.txt2017-07-25 15:38 427 Read alignment distribution
[ ]H1-101.bam2017-07-25 15:39 1.2GBinary alignments file
[ ]H1-101.bam.bai2017-07-25 15:39 859KIndex for binary alignments (bam) file
[ ]H1-101.bed2017-07-25 15:38 10MAnnotation or junction file
[ ]H1-101.bed.gz2017-07-25 15:39 2.6MAnnotation or junction file
[ ]H1-101.bed.gz.tbi2017-07-25 15:39 129KTabix index file
[ ]H1-101.bedgraph.gz2017-07-25 15:39 51MBedGraph (wiggle) format file
[ ]H1-101.bedgraph.gz.tbi2017-07-25 15:40 256KBedGraph (wiggle) format file
[ ]H1-101.mm.bam2017-07-25 15:41 357MBinary alignments file
[ ]H1-101.mm.bam.bai2017-07-25 15:40 643KIndex for binary alignments (bam) file
[ ]H1-101.mm.bedgraph.gz2017-07-25 15:39 7.0MBedGraph (wiggle) format file
[ ]H1-101.mm.bedgraph.gz.tbi2017-07-25 15:40 180KBedGraph (wiggle) format file
[ ]H1-101.sm.bam2017-07-25 15:40 821MBinary alignments file
[ ]H1-101.sm.bam.bai2017-07-25 15:41 765KIndex for binary alignments (bam) file
[ ]H1-101.sm.bedgraph.gz2017-07-25 15:41 45MBedGraph (wiggle) format file
[ ]H1-101.sm.bedgraph.gz.tbi2017-07-25 15:39 225KBedGraph (wiggle) format file
[ ]H1-75.FJ.bed.gz2017-07-25 15:41 4.5KLoraine Lab FindJunctions file
[ ]H1-75.FJ.bed.gz.tbi2017-07-25 15:40 2.9KTabix index file
[TXT]H1-75.alignments_distribution.txt2017-07-25 15:41 312 Read alignment distribution
[ ]H1-75.bam2017-07-25 15:39 72KBinary alignments file
[ ]H1-75.bam.bai2017-07-25 15:41 86KIndex for binary alignments (bam) file
[ ]H1-75.bed2017-07-25 15:40 30KAnnotation or junction file
[ ]H1-75.bed.gz2017-07-25 15:41 6.9KAnnotation or junction file
[ ]H1-75.bed.gz.tbi2017-07-25 15:40 3.2KTabix index file
[ ]H1-75.bedgraph.gz2017-07-25 15:38 8.7KBedGraph (wiggle) format file
[ ]H1-75.bedgraph.gz.tbi2017-07-25 15:40 4.1KBedGraph (wiggle) format file
[ ]H1-75.mm.bam2017-07-25 15:39 41KBinary alignments file
[ ]H1-75.mm.bam.bai2017-07-25 15:39 22KIndex for binary alignments (bam) file
[ ]H1-75.mm.bedgraph.gz2017-07-25 15:39 3.3KBedGraph (wiggle) format file
[ ]H1-75.mm.bedgraph.gz.tbi2017-07-25 15:39 700 BedGraph (wiggle) format file
[ ]H1-75.sm.bam2017-07-25 15:38 54KBinary alignments file
[ ]H1-75.sm.bam.bai2017-07-25 15:39 83KIndex for binary alignments (bam) file
[ ]H1-75.sm.bedgraph.gz2017-07-25 15:40 5.3KBedGraph (wiggle) format file
[ ]H1-75.sm.bedgraph.gz.tbi2017-07-25 15:38 3.7KBedGraph (wiggle) format file
[ ]H1-76.FJ.bed.gz2017-07-25 15:41 1.5MLoraine Lab FindJunctions file
[ ]H1-76.FJ.bed.gz.tbi2017-07-25 15:40 110KTabix index file
[TXT]H1-76.alignments_distribution.txt2017-07-25 15:41 406 Read alignment distribution
[ ]H1-76.bam2017-07-25 15:41 576MBinary alignments file
[ ]H1-76.bam.bai2017-07-25 15:39 913KIndex for binary alignments (bam) file
[ ]H1-76.bed2017-07-25 15:41 6.7MAnnotation or junction file
[ ]H1-76.bed.gz2017-07-25 15:39 1.7MAnnotation or junction file
[ ]H1-76.bed.gz.tbi2017-07-25 15:41 116KTabix index file
[ ]H1-76.bedgraph.gz2017-07-25 15:41 39MBedGraph (wiggle) format file
[ ]H1-76.bedgraph.gz.tbi2017-07-25 15:38 274KBedGraph (wiggle) format file
[ ]H1-76.mm.bam2017-07-25 15:41 242MBinary alignments file
[ ]H1-76.mm.bam.bai2017-07-25 15:41 681KIndex for binary alignments (bam) file
[ ]H1-76.mm.bedgraph.gz2017-07-25 15:41 7.6MBedGraph (wiggle) format file
[ ]H1-76.mm.bedgraph.gz.tbi2017-07-25 15:41 195KBedGraph (wiggle) format file
[ ]H1-76.sm.bam2017-07-25 15:41 334MBinary alignments file
[ ]H1-76.sm.bam.bai2017-07-25 15:41 757KIndex for binary alignments (bam) file
[ ]H1-76.sm.bedgraph.gz2017-07-25 15:41 31MBedGraph (wiggle) format file
[ ]H1-76.sm.bedgraph.gz.tbi2017-07-25 15:40 223KBedGraph (wiggle) format file
[ ]H1-94.FJ.bed.gz2017-07-25 15:40 5.3KLoraine Lab FindJunctions file
[ ]H1-94.FJ.bed.gz.tbi2017-07-25 15:38 3.0KTabix index file
[TXT]H1-94.alignments_distribution.txt2017-07-25 15:40 312 Read alignment distribution
[ ]H1-94.bam2017-07-25 15:41 109KBinary alignments file
[ ]H1-94.bam.bai2017-07-25 15:39 90KIndex for binary alignments (bam) file
[ ]H1-94.bed2017-07-25 15:41 41KAnnotation or junction file
[ ]H1-94.bed.gz2017-07-25 15:40 9.4KAnnotation or junction file
[ ]H1-94.bed.gz.tbi2017-07-25 15:38 3.7KTabix index file
[ ]H1-94.bedgraph.gz2017-07-25 15:41 12KBedGraph (wiggle) format file
[ ]H1-94.bedgraph.gz.tbi2017-07-25 15:41 4.9KBedGraph (wiggle) format file
[ ]H1-94.mm.bam2017-07-25 15:39 61KBinary alignments file
[ ]H1-94.mm.bam.bai2017-07-25 15:41 29KIndex for binary alignments (bam) file
[ ]H1-94.mm.bedgraph.gz2017-07-25 15:38 5.3KBedGraph (wiggle) format file
[ ]H1-94.mm.bedgraph.gz.tbi2017-07-25 15:39 1.2KBedGraph (wiggle) format file
[ ]H1-94.sm.bam2017-07-25 15:39 70KBinary alignments file
[ ]H1-94.sm.bam.bai2017-07-25 15:39 84KIndex for binary alignments (bam) file
[ ]H1-94.sm.bedgraph.gz2017-07-25 15:39 6.8KBedGraph (wiggle) format file
[ ]H1-94.sm.bedgraph.gz.tbi2017-07-25 15:38 4.1KBedGraph (wiggle) format file
[ ]H2-101.FJ.bed.gz2017-07-25 15:40 2.2MLoraine Lab FindJunctions file
[ ]H2-101.FJ.bed.gz.tbi2017-07-25 15:40 121KTabix index file
[TXT]H2-101.alignments_distribution.txt2017-07-25 15:41 427 Read alignment distribution
[ ]H2-101.bam2017-07-25 15:39 1.2GBinary alignments file
[ ]H2-101.bam.bai2017-07-25 15:40 822KIndex for binary alignments (bam) file
[ ]H2-101.bed2017-07-25 15:41 9.7MAnnotation or junction file
[ ]H2-101.bed.gz2017-07-25 15:40 2.4MAnnotation or junction file
[ ]H2-101.bed.gz.tbi2017-07-25 15:40 127KTabix index file
[ ]H2-101.bedgraph.gz2017-07-25 15:41 50MBedGraph (wiggle) format file
[ ]H2-101.bedgraph.gz.tbi2017-07-25 15:41 245KBedGraph (wiggle) format file
[ ]H2-101.mm.bam2017-07-25 15:40 360MBinary alignments file
[ ]H2-101.mm.bam.bai2017-07-25 15:38 601KIndex for binary alignments (bam) file
[ ]H2-101.mm.bedgraph.gz2017-07-25 15:38 6.4MBedGraph (wiggle) format file
[ ]H2-101.mm.bedgraph.gz.tbi2017-07-25 15:39 165KBedGraph (wiggle) format file
[ ]H2-101.sm.bam2017-07-25 15:38 833MBinary alignments file
[ ]H2-101.sm.bam.bai2017-07-25 15:39 743KIndex for binary alignments (bam) file
[ ]H2-101.sm.bedgraph.gz2017-07-25 15:39 45MBedGraph (wiggle) format file
[ ]H2-101.sm.bedgraph.gz.tbi2017-07-25 15:40 217KBedGraph (wiggle) format file
[ ]H2-75.FJ.bed.gz2017-07-25 15:41 2.3KLoraine Lab FindJunctions file
[ ]H2-75.FJ.bed.gz.tbi2017-07-25 15:41 1.6KTabix index file
[TXT]H2-75.alignments_distribution.txt2017-07-25 15:41 309 Read alignment distribution
[ ]H2-75.bam2017-07-25 15:40 47KBinary alignments file
[ ]H2-75.bam.bai2017-07-25 15:41 56KIndex for binary alignments (bam) file
[ ]H2-75.bed2017-07-25 15:40 14KAnnotation or junction file
[ ]H2-75.bed.gz2017-07-25 15:39 3.4KAnnotation or junction file
[ ]H2-75.bed.gz.tbi2017-07-25 15:41 1.9KTabix index file
[ ]H2-75.bedgraph.gz2017-07-25 15:41 4.2KBedGraph (wiggle) format file
[ ]H2-75.bedgraph.gz.tbi2017-07-25 15:41 2.3KBedGraph (wiggle) format file
[ ]H2-75.mm.bam2017-07-25 15:41 32KBinary alignments file
[ ]H2-75.mm.bam.bai2017-07-25 15:41 21KIndex for binary alignments (bam) file
[ ]H2-75.mm.bedgraph.gz2017-07-25 15:41 1.6KBedGraph (wiggle) format file
[ ]H2-75.mm.bedgraph.gz.tbi2017-07-25 15:38 584 BedGraph (wiggle) format file
[ ]H2-75.sm.bam2017-07-25 15:40 38KBinary alignments file
[ ]H2-75.sm.bam.bai2017-07-25 15:39 53KIndex for binary alignments (bam) file
[ ]H2-75.sm.bedgraph.gz2017-07-25 15:40 2.6KBedGraph (wiggle) format file
[ ]H2-75.sm.bedgraph.gz.tbi2017-07-25 15:39 1.9KBedGraph (wiggle) format file
[ ]H2-76.FJ.bed.gz2017-07-25 15:39 1.4MLoraine Lab FindJunctions file
[ ]H2-76.FJ.bed.gz.tbi2017-07-25 15:41 108KTabix index file
[TXT]H2-76.alignments_distribution.txt2017-07-25 15:40 404 Read alignment distribution
[ ]H2-76.bam2017-07-25 15:39 549MBinary alignments file
[ ]H2-76.bam.bai2017-07-25 15:39 862KIndex for binary alignments (bam) file
[ ]H2-76.bed2017-07-25 15:41 6.3MAnnotation or junction file
[ ]H2-76.bed.gz2017-07-25 15:40 1.6MAnnotation or junction file
[ ]H2-76.bed.gz.tbi2017-07-25 15:39 113KTabix index file
[ ]H2-76.bedgraph.gz2017-07-25 15:41 35MBedGraph (wiggle) format file
[ ]H2-76.bedgraph.gz.tbi2017-07-25 15:38 258KBedGraph (wiggle) format file
[ ]H2-76.mm.bam2017-07-25 15:41 221MBinary alignments file
[ ]H2-76.mm.bam.bai2017-07-25 15:41 626KIndex for binary alignments (bam) file
[ ]H2-76.mm.bedgraph.gz2017-07-25 15:41 5.4MBedGraph (wiggle) format file
[ ]H2-76.mm.bedgraph.gz.tbi2017-07-25 15:40 174KBedGraph (wiggle) format file
[ ]H2-76.sm.bam2017-07-25 15:40 328MBinary alignments file
[ ]H2-76.sm.bam.bai2017-07-25 15:39 727KIndex for binary alignments (bam) file
[ ]H2-76.sm.bedgraph.gz2017-07-25 15:41 29MBedGraph (wiggle) format file
[ ]H2-76.sm.bedgraph.gz.tbi2017-07-25 15:40 212KBedGraph (wiggle) format file
[ ]H2-94.FJ.bed.gz2017-07-25 15:41 7.7KLoraine Lab FindJunctions file
[ ]H2-94.FJ.bed.gz.tbi2017-07-25 15:41 4.4KTabix index file
[TXT]H2-94.alignments_distribution.txt2017-07-25 15:39 314 Read alignment distribution
[ ]H2-94.bam2017-07-25 15:40 136KBinary alignments file
[ ]H2-94.bam.bai2017-07-25 15:41 112KIndex for binary alignments (bam) file
[ ]H2-94.bed2017-07-25 15:40 50KAnnotation or junction file
[ ]H2-94.bed.gz2017-07-25 15:39 12KAnnotation or junction file
[ ]H2-94.bed.gz.tbi2017-07-25 15:39 5.0KTabix index file
[ ]H2-94.bedgraph.gz2017-07-25 15:39 15KBedGraph (wiggle) format file
[ ]H2-94.bedgraph.gz.tbi2017-07-25 15:40 6.7KBedGraph (wiggle) format file
[ ]H2-94.mm.bam2017-07-25 15:38 62KBinary alignments file
[ ]H2-94.mm.bam.bai2017-07-25 15:41 30KIndex for binary alignments (bam) file
[ ]H2-94.mm.bedgraph.gz2017-07-25 15:40 5.6KBedGraph (wiggle) format file
[ ]H2-94.mm.bedgraph.gz.tbi2017-07-25 15:38 1.3KBedGraph (wiggle) format file
[ ]H2-94.sm.bam2017-07-25 15:41 97KBinary alignments file
[ ]H2-94.sm.bam.bai2017-07-25 15:41 106KIndex for binary alignments (bam) file
[ ]H2-94.sm.bedgraph.gz2017-07-25 15:38 10KBedGraph (wiggle) format file
[ ]H2-94.sm.bedgraph.gz.tbi2017-07-25 15:39 5.9KBedGraph (wiggle) format file
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