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<h1>Chlorocebus sabaeus Mar 2014 (Chlorocebus_sabaeus 1.1/chlSab2) genome assembly</h1>
<p>
The files listed below are formatted for visualization in the Integrated Genome
Browser, available from <a href="https://bioviz.org">BioViz.org</a>.
</p>
<p>
Annotation (bed) and alignment (psl) files were downloaded from the UCSC Genome
Bioinformatics Table Browser. Each file is named for its corresponding table in the
UCSC Genome database. See the <a href="annots.xml">annots.xml</a> meta-data file in
this directory for details.
</p>
<p>
Files with extension .gz were compressed and indexed using bgzip and
tabix tools from <a href="https://www.htslib.org>htslib.org</a>.
</p>
<p>
The file named C_sabaeus_Mar_2014.2bit contains sequence data and was downloaded from the UCSC Genome
Bioinformatics <a href="http://hgdownload-test.sdsc.edu/downloads.html">downloads
page</a>. To convert a .2bit to fasta, use twoBitToFa. The file
<a href="genome.txt">genome.txt</a> lists sequences and their sizes and was made from 
C_sabaeus_Mar_2014.2bit sequence file using twoBitInfo.
</p>
<p>
Both twoBitInfo and twoBitToFa are
available from <a href="http://hgdownload.cse.ucsc.edu/admin/exe/">http://hgdownload.cse.ucsc.edu/admin/exe/</a>.
</p>
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[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[TXT]genome.txt2023-06-16 14:17 52KChromosome lengths and assembly information
[ ]annots.xml2023-06-16 14:17 400 Annotation and data file list
[ ]C_sabaeus_Mar_2014_ensGene.bed.gz.tbi2023-06-16 14:17 134KTabix index file
[ ]C_sabaeus_Mar_2014_ensGene.bed.gz2023-06-16 14:17 2.0MAnnotation or junction file
[ ]C_sabaeus_Mar_2014.2bit2023-06-16 14:17 697MSequence data in blat 2bit format
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