strapdown: '/styling/strapdown/v/0.2/strapdown.js'};
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<title>Integrated Genome Browser QuickLoad Site</title>
<body>
<h1>Welcome to IGBQuickload</h1>
<p>
Welcome Integrated Genome Browser QuickLoad. 
</p>
<p>
Data available here are configured for visualization
in the <a href="https://bioviz.org">Integrated Genome Browser</a>.
</p>
<h2>About QuickLoad</h2>
<p>
A QuickLoad site is a simple system of directories, sequence and other data
files designed for visualization in Integrated Genome Browser. It's a convenient
way to share data sets with other labs and with the public. For more information,
 see the IGB User's Guide: 
<a href="https://wiki.transvar.org/display/igbman/Sharing+data+using+QuickLoad+sites">Sharing data using QuickLoad Sites</a>.
</p>
<p>
All files are version controlled in a <a href="https://svn.bioviz.org/viewvc/genomes/quickload/">publicly-accessible subversion repository</a>. For information on how to check out and deploy your own copy, contact Ann Loraine.
</p>
</body>
</html>
[ICO]NameLast modifiedSizeDescription
[DIR]Parent Directory  -  
[DIR]A_gambiae_Feb_2003/27-Sep-2018 13:47 - Anopheles gambiae (Feb 2003) mosquito (anoGam1/IAGP v.MOZ2)
[DIR]A_lyrata_Apr_2011/27-Sep-2018 13:19 - Arabidopsis lyrata JGI v1.0 assembly
[DIR]A_melanoleuca_Dec_2009/27-Sep-2018 13:25 - Ailuropoda melanoleuca (Dec 2009) giant panda (ailMel1/BGI-Shenzhen AilMel 1.0)
[DIR]A_mellifera_Jan_2005/27-Sep-2018 13:43 - Apis mellifera (honeybee) Jan 2005 (apiMel2/Baylor College of Medicine HGSC v.Amel_2.0 )
[DIR]A_thaliana_Apr_2008/27-Sep-2018 13:43 - Arabidopsis thaliana TAIR8 genome assembly
[DIR]A_thaliana_Jun_2009/09-Oct-2018 13:54 - Arabidopsis thaliana TAIR9, TAIR10 genome assembly
[DIR]B_distachyon_Aug_2010/27-Sep-2018 13:21 - Brachypodium distachyon (a model grass) JGI v1.0 8x assembly
[DIR]B_taurus_Oct_2011/27-Sep-2018 13:43 - Bos taurus (cow) bosTau7 Oct 2011 assembly
[DIR]C_albicans_SC5314_Nov_2008/27-Sep-2018 13:25 - Candida albicans
[DIR]C_albicans_WO-1_Jul_2010/27-Sep-2018 13:19 - Candida albicans
[DIR]C_elegans_May_2008/27-Sep-2018 13:43 - C. elegans May 2008 WS190/ce6
[DIR]C_elegans_Oct_2010/27-Sep-2018 14:29 - C. elegans Oct 2010 (WS220/ce10)
[DIR]C_papaya_Aug_2010/27-Sep-2018 13:25 - Papaya
[DIR]C_porcellus_Feb_2008/27-Sep-2018 13:34 - Cavia porcellus (Feb 2008) guinea pig (cavPor3)
[DIR]C_reinhardtii_Nov_2010/27-Sep-2018 14:01 - Chlamy (an algal genome)
[DIR]C_sativa_DH55_Apr_2014/27-Sep-2018 13:28 - Camelina, false flax, an oilseed crop
[DIR]D_discoideum_Ax4_May_2009/27-Sep-2018 13:28 - Slime mold
[DIR]D_melanogaster_Apr_2006/27-Sep-2018 13:19 - Drosophila melanogaster (Apr 2006) fruit fly (dm3/BDGP R5)
[DIR]D_melanogaster_Jul_2014/27-Sep-2018 13:21 - Drosophila melanogaster (July 2014) fruit fly (dmel_r6.03_FB2014_06)
[DIR]D_rerio_Jul_2010/27-Sep-2018 13:32 - Danio rerio (Jul 2010) zebrafish (danRer7/Zv9)
[DIR]E_caballus_Sep_2007/27-Sep-2018 14:14 - Equus caballus (Sep 2007) horse (equCab2)
[DIR]E_coli_K12-MG1655_Jan_2012/27-Sep-2018 13:35 - Escherichia coli K12-MG1655
[DIR]F_catus_Sep_2011/27-Sep-2018 13:31 - Felis catus (Sep 2011) cat (ICGSC Felis_catus 6.2/felCat5)
[DIR]F_vesca_Sep_2011/27-Sep-2018 13:54 - Fragaria vesca (woodland strawberry) v1.1
[DIR]G_gallus_Nov_2011/27-Sep-2018 13:27 - Gallus gallus (Nov 2011) chicken (galGal4/ICGC Gallus-gallus-4.0)
[DIR]G_max_Aug_2010/27-Sep-2018 14:02 - Soybean Glyma1
[DIR]G_max_Jan_2014/27-Sep-2018 13:29 - Soybean Glyma2
[DIR]H_sapiens_Dec_2013/27-Sep-2018 13:40 - Homo sapiens hg38 (Genome Reference Consortium GRCh38)
[DIR]H_sapiens_Feb_2009/27-Sep-2018 13:46 - Homo sapiens hg19 (Genome Reference Consortium GRCh37)
[DIR]H_sapiens_Mar_2006/27-Sep-2018 14:26 - Homo sapiens hg18 (Genome Reference Consortium GRCh36)
[DIR]H_sapiens_May_2004/27-Sep-2018 14:00 - Homo sapiens hg17 (Genome Reference Consortium GRCh35)
[DIR]L_africana_Jul_2009/27-Sep-2018 13:21 - Loxodonta africana (Jul 2009) elephant (loxAfr3)
[DIR]L_passim_Apr_2014/27-Sep-2018 13:27 - Lotmaria passim, strain SF, Crithidia mellificae strain SF, whole genome shotgun sequencing project
[DIR]M_acuminata_DH_Pahang_Jan_2016/27-Sep-2018 13:35 - Musa acuminata DH Pahang (Jan 2016) banana (v2)
[DIR]M_domestica_Borkh_Jun_2017/27-Sep-2018 13:31 - Malus domestica (Jun 2017) apple
[DIR]M_musculus_Dec_2011/27-Sep-2018 14:19 - Mus musculus (Dec 2011) mouse (GRCm38/mm10)
[DIR]M_musculus_Feb_2006/27-Sep-2018 14:29 - Mus musculus (Feb 2006) mouse (NCBI36/mm8)
[DIR]M_musculus_Jul_2007/27-Sep-2018 13:54 - Mus musculus (Jul 2007) mouse (NCBI37/mm9)
[DIR]M_truncatula_Mar_2009/27-Sep-2018 13:35 - Medicago truncatula
[DIR]N_vectensis_Jun_2007/27-Sep-2018 14:05 - Nematostella vectensis, starlet sea anemone
[DIR]O_aries_Feb_2010/27-Sep-2018 14:04 - Ovis aries (Feb 2010) sheep (ISGC Ovis_aries_1/oviAri1)
[DIR]O_sativa_japonica_Jun_2009/27-Sep-2018 13:34 - Rice, japonic variety
[DIR]O_sativa_japonica_Oct_2011/27-Sep-2018 13:54 - Rice, japonic variety Os-Nipponbare-Reference-IRGSP-1.0 assembly
[DIR]P_patens_Jan_2008/27-Sep-2018 13:48 - Physcomitrella patens (moss)
[DIR]P_persica_Apr_2010/27-Sep-2018 14:10 - Peach v1 genome assembly
[DIR]P_trichocarpa_Aug_2012/27-Sep-2018 13:48 - Black cottonwood (poplar)
[DIR]P_trichocarpa_Jan_2010/27-Sep-2018 13:24 - Black cottonwood (poplar)
[DIR]P_troglodytes_Oct_2010/27-Sep-2018 13:23 - Pan troglodytes (Oct 2010) chimpanzee (CGSC 2.1.3/panTro3)
[DIR]R_communis_May_2008/27-Sep-2018 14:30 - Castor bean
[DIR]R_norvegicus_Mar_2012/27-Sep-2018 14:10 - Rattus Norvegicus (Mar 2012) rat (RGSC 5.0/rn5)
[DIR]S_bicolor_Jan_2009/27-Sep-2018 14:21 - Sorghum bicolor
[DIR]S_bicolor_Jun_2013/27-Sep-2018 13:29 - Sorghum bicolor
[DIR]S_cerevisiae_Apr_2011/27-Sep-2018 13:34 - Budding yeast
[DIR]S_cerevisiae_Jun_2008/27-Sep-2018 13:35 -  
[DIR]S_lycopersicum_Feb_2014/27-Sep-2018 13:55 - Solanum lycopersicum (Feb 2014) tomato (SL2.50)
[DIR]S_lycopersicum_Feb_2017/27-Sep-2018 14:01 - Solanum lycopersicum (Feb 2017) tomato (SL3.0)
[DIR]S_lycopersicum_May_2012/27-Sep-2018 14:20 - Solanum lycopersicum (May 2012) tomato (SL2.40)
[DIR]S_pombe_May_2012/27-Sep-2018 14:02 - S. pombe (May 2012) fission yeast
[DIR]S_tuberosum_DM_Jul_2011/04-Oct-2018 12:30 -  
[DIR]T_castaneum_Mar_2008/27-Sep-2018 13:48 - Tribolium castaneum (March 2008) red flour beetle
[DIR]T_kodakaraensis_KOD1_May_2004/27-Sep-2018 13:40 - Thermococcus kodakaraensis
[DIR]T_parvula_May_2012/27-Sep-2018 14:05 - Thellungiella parvula (salt cress) v2, May 2012
[DIR]T_rubripes_Oct_2011/27-Sep-2018 13:28 - Takifugu rubripes (Oct 2011) Fugu (FUGU5/fr3)
[DIR]V_carteri_Jul_2010/27-Sep-2018 14:29 - Volvox
[DIR]V_vinifera_Mar_2010/27-Sep-2018 13:35 - Wine grape 12x assembly
[DIR]X_tropicalis_Nov_2009/27-Sep-2018 13:41 - Xenopus tropicalis JGI 4.2/xenTro3
[DIR]Y_lipolytica_CLIB122_Jul_2004/27-Sep-2018 13:19 - Yarrowia lipolytica CLIB122 (Jul 2004) Assembly GCA_000002525.2
[DIR]Y_lipolytica_PO1f_May_2014/27-Sep-2018 13:46 - Yarrowia lipolytica PO1f (May 2014) Assembly GCA_000590845.2
[DIR]Y_lipolytica_WSH-Z06_Mar_2014/27-Sep-2018 13:34 - Yarrowia lipolytica WSH-Z06 (Mar 2014) Assembly GCA_000613155.1
[DIR]Z_mays_B73_Mar_2010/27-Sep-2018 13:27 - Zea mays B73 RefGen_v2 assembly
[TXT]contents.txt04-Oct-2018 12:30 4.6KAvailable genome assemblies and their titles
[IMG]favicon.ico27-Sep-2018 14:30 7.1KIcon IGB displays for this data source in the Data Access tab
[TXT]species.txt04-Oct-2018 12:30 84 Taxonomic and common names for species, shown in IGB species menu
Apache/2.2.15 (Red Hat) Server at igbquickload.org Port 80