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<html> <body> <h1>Cannabis sativa CBDRx (Dec 2018) genome assembly</h1> <p> The files listed below are formatted for visualization in the Integrated Genome Browser, available from <a href="https://bioviz.org">BioViz.org</a>. </p> <p> The file named C_sativa_CBDRx_Dec_2018.2bit contains sequence data from <a href="http://cannabisgenome.org/cs10files/cs10.fasta.gz">http://cannabisgenome.org/cs10files/cs10.fasta.gz</a> converted to 2bit format using twoBitToFa. </p> <p> The file <a href="genome.txt">genome.txt</a> lists sequences and their sizes. It was made from C_sativa_CBDRx_Dec_2018.2bit using twoBitInfo and then manually edited to list C and M chromosomes after the nuclear chromosome assemblies. Both twoBitInfo and twoBitToFa are available from <a href="http://hgdownload.cse.ucsc.edu/admin/exe/">http://hgdownload.cse.ucsc.edu/admin/exe/</a>. </p> <p> For more information about this genome assembly, visit <a href="http://cannabisgenome.org/">cannabisgenome.org</a> and associated article <a href="https://www.biorxiv.org/content/10.1101/458083v4">A complete Cannabis chromosome assembly and adaptive admixture for elevated cannabidiol (CBD) content</a>. </p> </body> </html>
Name | Last modified | Size | Description | |
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Parent Directory | - | |||
C_sativa_CBDRx_Dec_2018.2bit | 2023-06-16 14:26 | 209M | Sequence data in blat 2bit format | |
genome.txt | 2023-06-16 14:26 | 2.9K | Chromosome lengths and assembly information |