strapdown: '/styling/strapdown/v/0.2/strapdown.js'};
<html> <body> <h1>Hypsibius exemplaris strain Z151 (Apr 2017) genome assembly</h1> <p> The files listed below are formatted for visualization in the Integrated Genome Browser, available from <a href="https://bioviz.org">BioViz.org</a>. </p> <p> The gene model annotation file H_exemplaris_Z151_Apr_2017.bed.gz was downloaded from the NCBI Web site as GCA_002082055.1_nHd_3.1_genomic.gff.gz and converted to BED-detail (bed14) format April 3, 2024. </p> <p> The file named H_exemplaris_Z151_Apr_2017.2bit contains sequence data. It was made from fasta file also downloaded from <a href="https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_002082055.1/">NCBI</a>. To convert it back to fasta, use twoBitToFa. </p> <p> The file <a href="genome.txt">genome.txt</a> lists sequences and their sizes and was made from the 2bit sequence file using twoBitInfo. </p> <p> You can get twoBitInfo, twoBitToFa, faToTwoBit, and related programs from <a href="http://hgdownload.cse.ucsc.edu/admin/exe/">http://hgdownload.cse.ucsc.edu/admin/exe/</a>. </p> </body> </html>
Name | Last modified | Size | Description | |
---|---|---|---|---|
Parent Directory | - | |||
H_exemplaris_Z151_Apr_2017.bed.gz | 2024-04-03 15:40 | 1.0M | Annotation or junction file | |
genome.txt | 2024-04-03 15:40 | 29K | Chromosome lengths and assembly information | |
H_exemplaris_Z151_Apr_2017.2bit | 2024-04-03 15:40 | 29M | Sequence data in blat 2bit format | |
H_exemplaris_Z151_Apr_2017.bed.gz.tbi | 2024-04-03 15:40 | 32K | Tabix index file | |
H_exemplaris_Z151_Apr_2017.fa | 2024-05-01 15:23 | 101M | Hypsibius exemplaris strain Z151 (Apr 2017) water bear (nHd_3.1 assembly) | |
annots.xml | 2024-05-01 15:23 | 488 | Annotation and data file list | |
H_exemplaris_Z151_Apr_2017.gtf | 2024-05-01 15:23 | 16M | Hypsibius exemplaris strain Z151 (Apr 2017) water bear (nHd_3.1 assembly) |