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<h1>S. cerevisiae strain S288C (Apr 2011) budding yeast (sacCer3) genome assembly</h1>
<p>
The files listed below are formatted for visualization in the Integrated Genome
Browser, available from <a href="https://bioviz.org">BioViz.org</a>.
</p>
<p>
Annotation (bed) and alignment (psl) files (if available) were downloaded from the UCSC Genome
Bioinformatics Table Browser. Each file is named for its corresponding table in the
UCSC Genome database. See the <a href="annots.xml">annots.xml</a> meta-data file in
this directory for details.
</p>
<p>
Files with extension .gz were compressed and indexed using bgzip and
tabix tools from <a href="https://www.htslib.org">htslib.org</a>.
</p>
<p>
The file named S_cerevisiae_Apr_2011.2bit contains sequence data and is from the UCSC Genome
Bioinformatics Web site. To convert a .2bit to fasta, use twoBitToFa. The file
<a href="genome.txt">genome.txt</a> lists sequences and their sizes and was made from 
S_cerevisiae_Apr_2011.2bit sequence file using twoBitInfo.
</p>
<p>
Both twoBitInfo and twoBitToFa are
available from <a href="http://hgdownload.cse.ucsc.edu/admin/exe/">http://hgdownload.cse.ucsc.edu/admin/exe/</a>.
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[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]S_cerevisiae_Apr_2011.2bit2023-06-16 13:21 2.9MSequence data in blat 2bit format
[ ]S_cerevisiae_Apr_2011_ncbiRefSeq.bed.gz2023-06-16 13:21 184KAnnotation or junction file
[ ]S_cerevisiae_Apr_2011_ncbiRefSeq.bed.gz.tbi2023-06-16 13:21 2.6KTabix index file
[ ]annots.xml2023-06-16 13:21 372 Annotation and data file list
[TXT]genome.txt2023-06-16 13:21 229 Chromosome lengths and assembly information
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