strapdown: '/styling/strapdown/v/0.2/strapdown.js'};
The files listed below are formatted for visualization in the Integrated Genome Browser, available from [BioViz.org</u>](https://bioviz.org) Annotation and sequence data are from the paper - A draft genome of the honey bee trypanosomatid parasite Crithidia mellificae. This paper can be freely found at - [http://www.ncbi.nlm.nih.gov/pubmed/24743507](http://www.ncbi.nlm.nih.gov/pubmed/24743507) Original sequence file can be found at - [http://www.ncbi.nlm.nih.gov/bioproject/PRJNA78249](http://www.ncbi.nlm.nih.gov/bioproject/PRJNA78249) Files with extension .gz were compressed and indexed using bgzip and tabix tools from [samtools.sourceforge.net](http://samtools.sourceforge.net/). To convert a .2bit to fasta, use twoBitToFa. twoBitToFa is available from [http://hgdownload.cse.ucsc.edu/admin/exe/](http://hgdownload.cse.ucsc.edu/admin/exe/).
Name | Last modified | Size | Description | |
---|---|---|---|---|
Parent Directory | - | |||
annots.xml | 2023-06-16 14:35 | 1.5K | Annotation and data file list | |
match_Crithidia.bed.gz.tbi | 2023-06-16 14:35 | 26K | Tabix index file | |
gene_Crithidia.bed.gz.tbi | 2023-06-16 14:35 | 27K | Tabix index file | |
Exon_Crithidia.bed.gz.tbi | 2023-06-16 14:35 | 27K | Tabix index file | |
mRNA_Crithidia.bed.gz.tbi | 2023-06-16 14:35 | 27K | Tabix index file | |
CDS_Crithidia.bed.gz.tbi | 2023-06-16 14:35 | 28K | Tabix index file | |
Protein_match_Crithidia.bed.gz.tbi | 2023-06-16 14:35 | 30K | Tabix index file | |
Expressed_sequence_match_Crithidia.bed.gz.tbi | 2023-06-16 14:35 | 31K | Tabix index file | |
genome.txt | 2023-06-16 14:35 | 46K | Chromosome lengths and assembly information | |
Exon_Crithidia.bed.gz | 2023-06-16 14:35 | 133K | Annotation or junction file | |
CDS_Crithidia.bed.gz | 2023-06-16 14:35 | 138K | Annotation or junction file | |
gene_Crithidia.bed.gz | 2023-06-16 14:35 | 146K | Annotation or junction file | |
mRNA_Crithidia.bed.gz | 2023-06-16 14:35 | 159K | Annotation or junction file | |
match_Crithidia.bed.gz | 2023-06-16 14:35 | 175K | Annotation or junction file | |
Expressed_sequence_match_Crithidia.bed.gz | 2023-06-16 14:35 | 730K | Annotation or junction file | |
Protein_match_Crithidia.bed.gz | 2023-06-16 14:35 | 2.8M | Annotation or junction file | |
L_passim_Apr_2014.2bit | 2023-06-16 14:35 | 7.9M | Sequence data in blat 2bit format |