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<h1>Sorghum bicolor (Jun 2013) version 2.0 genome assembly</h1>
<p>
The files listed below are formatted for visualization in the Integrated Genome
Browser, available from <a href="http://www.bioviz.org/igb">BioViz.org</a>.
</p>
<p>
The gene model annotation file (S_bicolor_Jun_2013.bed.gz) was made from GFF and gene information files downloaded in Nov, 2014 from Phytozome. 
</p>
<p>
The file named S_bicolor_Jun_2013.2bit contains sequence data. It
was made from fasta file also downloaded from Phytozome. To convert it back
to fasta, use twoBitToFa. 
</p>
The file
<a href="genome.txt">genome.txt</a> lists sequences and their sizes and was made from the 2bit sequence file using twoBitInfo.
</p>
<p>
For more information,
see <a href="http://lorainelab.org/?p=513">this post</a>
at <a href="http://www.lorainelab.org">LoraineLab.org</a>. 
</p>
<p>
You can get twoBitInfo, twoBitToFa, faToTwoBit, and related programs from <a href="http://hgdownload.cse.ucsc.edu/admin/exe/">http://hgdownload.cse.ucsc.edu/admin/exe/</a>.
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[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]S_bicolor_Jun_2013.bed.gz.tbi2023-06-16 13:37 187KTabix index file
[ ]S_bicolor_Jun_2013.2bit2023-06-16 13:37 173MSequence data in blat 2bit format
[TXT]genome.txt2023-06-16 13:37 25KChromosome lengths and assembly information
[ ]S_bicolor_Jun_2013.bed.gz2023-06-16 13:37 1.8MAnnotation or junction file
[ ]annots.xml2023-06-16 13:37 366 Annotation and data file list
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